Available software on Bioinf Cluster#


BioRollout#

/opt/bio

ROCKS

Bioinf software#

/usr/share/apps

  • psipred25
  • disopred2
  • memsat3

Fasta Databases (updated monthly)#

/opt/share

DatabaseDescription
ncbi-nr plain old nr to be updated monthly
ncbi-nr-masked nr masked with pfilt
uniref90 uniref filtered at 90% identity
uniref90-masked uniref filtered at 90% identity and masked with pfilt
nrdb non redundant database of of uniref + ncbi with filtering
nrdb-masked non redundant database of uniref + ncbi masked with pfilt

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« This page (revision-1) was last changed on 08-Feb-2007 15:56 by UnknownAuthor