Domenico:
Cation contacts from many templates cluster very well and their role is documented in the literature. They involve Gln11, Asp53 and Asp55 in the target. Other "valid" ligands - Beryllium trifluoride ion or analogues - do not represent matural substrates, so i would not include them in the ligand binding site prediction.

PFRMAT FN
TARGET T0634
AUTHOR 7656-5034-1890
REMARK Sequence consensus of contacts between homologous structures and ligands
METHOD pGenTHREADER and PDBSum and CSA data mining.
MODEL 1
Binding site: 11, 53, 55
END

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« This page (revision-1) was last changed on 16-Jul-2010 12:59 by UnknownAuthor